STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR20323.1Conserved hypothetical protein o328; COG0435 Predicted glutathione S-transferase. (334 aa)    
Predicted Functional Partners:
EAR23105.1
COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1.
 
      0.710
EAR20322.1
Hypothetical protein.
       0.568
EAR22252.1
Trehalose-6-phosphate phosphatase, putative; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
   0.422
Your Current Organism:
Nitrococcus mobilis
NCBI taxonomy Id: 314278
Other names: N. mobilis Nb-231, Nitrococcus mobilis Nb-231, Nitrococcus mobilis str. Nb-231, Nitrococcus mobilis strain Nb-231
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.