STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR20904.1Putative type-4 fimbrial pilin related signal peptide protein; COG4970 Tfp pilus assembly protein FimT. (185 aa)    
Predicted Functional Partners:
EAR20901.1
COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1.
 
  
 0.881
EAR20903.1
COG4968 Tfp pilus assembly protein PilE.
 
  
 0.874
EAR20898.1
Putative pre-pilin leader sequence; COG4967 Tfp pilus assembly protein PilV.
 
  
 0.873
EAR20899.1
COG4966 Tfp pilus assembly protein PilW.
 
  
 0.868
EAR20900.1
COG4726 Tfp pilus assembly protein PilX.
 
  
 0.860
EAR21947.1
COG3168 Tfp pilus assembly protein PilP.
  
  
 0.690
EAR21946.1
Type 4 fimbrial biogenesis protein PilO; COG3167 Tfp pilus assembly protein PilO.
 
   
 0.633
EAR21945.1
COG3166 Tfp pilus assembly protein PilN.
 
  
 0.624
EAR22521.1
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
  
     0.564
EAR22520.1
Hypothetical protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases.
 
     0.528
Your Current Organism:
Nitrococcus mobilis
NCBI taxonomy Id: 314278
Other names: N. mobilis Nb-231, Nitrococcus mobilis Nb-231, Nitrococcus mobilis str. Nb-231, Nitrococcus mobilis strain Nb-231
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