STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR22192.1Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein. (606 aa)    
Predicted Functional Partners:
EAR20309.1
Hypothetical protein.
    
 0.993
EAR20971.1
Hypothetical protein.
    
 0.992
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.992
EAR23002.1
Putative ATP-dependent helicase; COG0553 Superfamily II DNA/RNA helicases, SNF2 family.
 
 0.990
EAR23003.1
Putative ATP-dependent helicase; COG0553 Superfamily II DNA/RNA helicases, SNF2 family.
 
 0.990
EAR23004.1
ATP-dependent helicase.
  
 0.988
EAR23097.1
Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
    
 0.988
apaH
Bis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
   
 0.987
EAR20226.1
Putative dual use protein Tyr:Ser/Thr phosphatase; COG2453 Predicted protein-tyrosine phosphatase.
  
 0.948
EAR22191.1
COG1360 Flagellar motor protein.
 
     0.945
Your Current Organism:
Nitrococcus mobilis
NCBI taxonomy Id: 314278
Other names: N. mobilis Nb-231, Nitrococcus mobilis Nb-231, Nitrococcus mobilis str. Nb-231, Nitrococcus mobilis strain Nb-231
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.