STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR20380.1Hypothetical protein. (182 aa)    
Predicted Functional Partners:
EAR20379.1
Putative arac-family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
     0.990
EAR20381.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
 
     0.758
EAR22518.1
COG0067 Glutamate synthase domain 1.
    
  0.720
EAR20503.1
COG0642 Signal transduction histidine kinase.
  
 
 0.706
EAR22837.1
Phosphate acetyltransferase; COG0281 Malic enzyme.
     
 0.660
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.650
EAR20689.1
Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins.
  
 
 0.626
EAR21796.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
     
 0.543
EAR22122.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
  
     0.510
EAR20358.1
Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Hpt; COG0642 Signal transduction histidine kinase.
   
 
 0.479
Your Current Organism:
Nitrococcus mobilis
NCBI taxonomy Id: 314278
Other names: N. mobilis Nb-231, Nitrococcus mobilis Nb-231, Nitrococcus mobilis str. Nb-231, Nitrococcus mobilis strain Nb-231
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.