Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAR20592.1 | EAR22850.1 | NB231_07332 | NB231_10368 | Hypothetical protein. | Hypothetical protein. | 0.590 |
EAR20592.1 | EAR22862.1 | NB231_07332 | NB231_10428 | Hypothetical protein. | COG2982 Uncharacterized protein involved in outer membrane biogenesis. | 0.543 |
EAR21056.1 | EAR22862.1 | NB231_07797 | NB231_10428 | COG2911 Uncharacterized protein conserved in bacteria. | COG2982 Uncharacterized protein involved in outer membrane biogenesis. | 0.488 |
EAR21703.1 | EAR22862.1 | NB231_03200 | NB231_10428 | Hypothetical protein. | COG2982 Uncharacterized protein involved in outer membrane biogenesis. | 0.403 |
EAR22850.1 | EAR20592.1 | NB231_10368 | NB231_07332 | Hypothetical protein. | Hypothetical protein. | 0.590 |
EAR22850.1 | EAR22862.1 | NB231_10368 | NB231_10428 | Hypothetical protein. | COG2982 Uncharacterized protein involved in outer membrane biogenesis. | 0.428 |
EAR22861.1 | EAR22862.1 | NB231_10423 | NB231_10428 | COG5622 Protein required for attachment to host cells. | COG2982 Uncharacterized protein involved in outer membrane biogenesis. | 0.491 |
EAR22861.1 | EAR22863.1 | NB231_10423 | NB231_10433 | COG5622 Protein required for attachment to host cells. | A/G-specific adenine glycosylase MutY; Adenine glycosylase active on G-A mispairs. | 0.491 |
EAR22861.1 | EAR22864.1 | NB231_10423 | NB231_10438 | COG5622 Protein required for attachment to host cells. | Fe(II) trafficking protein YggX; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | 0.463 |
EAR22861.1 | EAR22865.1 | NB231_10423 | NB231_10443 | COG5622 Protein required for attachment to host cells. | Beta-lactamase-like protein; COG0491 Zn-dependent hydrolases, including glyoxylases. | 0.430 |
EAR22862.1 | EAR20592.1 | NB231_10428 | NB231_07332 | COG2982 Uncharacterized protein involved in outer membrane biogenesis. | Hypothetical protein. | 0.543 |
EAR22862.1 | EAR21056.1 | NB231_10428 | NB231_07797 | COG2982 Uncharacterized protein involved in outer membrane biogenesis. | COG2911 Uncharacterized protein conserved in bacteria. | 0.488 |
EAR22862.1 | EAR21703.1 | NB231_10428 | NB231_03200 | COG2982 Uncharacterized protein involved in outer membrane biogenesis. | Hypothetical protein. | 0.403 |
EAR22862.1 | EAR22850.1 | NB231_10428 | NB231_10368 | COG2982 Uncharacterized protein involved in outer membrane biogenesis. | Hypothetical protein. | 0.428 |
EAR22862.1 | EAR22861.1 | NB231_10428 | NB231_10423 | COG2982 Uncharacterized protein involved in outer membrane biogenesis. | COG5622 Protein required for attachment to host cells. | 0.491 |
EAR22862.1 | EAR22863.1 | NB231_10428 | NB231_10433 | COG2982 Uncharacterized protein involved in outer membrane biogenesis. | A/G-specific adenine glycosylase MutY; Adenine glycosylase active on G-A mispairs. | 0.830 |
EAR22862.1 | EAR22864.1 | NB231_10428 | NB231_10438 | COG2982 Uncharacterized protein involved in outer membrane biogenesis. | Fe(II) trafficking protein YggX; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | 0.793 |
EAR22862.1 | EAR22865.1 | NB231_10428 | NB231_10443 | COG2982 Uncharacterized protein involved in outer membrane biogenesis. | Beta-lactamase-like protein; COG0491 Zn-dependent hydrolases, including glyoxylases. | 0.664 |
EAR22863.1 | EAR22861.1 | NB231_10433 | NB231_10423 | A/G-specific adenine glycosylase MutY; Adenine glycosylase active on G-A mispairs. | COG5622 Protein required for attachment to host cells. | 0.491 |
EAR22863.1 | EAR22862.1 | NB231_10433 | NB231_10428 | A/G-specific adenine glycosylase MutY; Adenine glycosylase active on G-A mispairs. | COG2982 Uncharacterized protein involved in outer membrane biogenesis. | 0.830 |
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