STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR20787.1Hypothetical protein; COG0241 Histidinol phosphatase and related phosphatases. (181 aa)    
Predicted Functional Partners:
gmhA
COG0279 Phosphoheptose isomerase.
 
 0.996
hldE
LPS biosynthesis protein RfaE; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
  
 0.987
EAR23503.1
Putative mannose-1-phosphate guanyltransferase; COG0517 FOG: CBS domain.
 
 0.916
EAR20431.1
Lipopolysaccharide heptosyltransferase-1, putative; COG0859 ADP-heptose:LPS heptosyltransferase.
  
 0.868
EAR20786.1
COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
    0.830
glyS
Glycine--tRNA ligase; COG0751 Glycyl-tRNA synthetase, beta subunit.
  
    0.823
glyQ
Glycine--tRNA ligase; COG0752 Glycyl-tRNA synthetase, alpha subunit.
       0.821
EAR20526.1
COG1087 UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
    
 0.772
EAR22231.1
Mannose-1-phosphate guanylyltransferase-like protein; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
  0.738
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
    
 0.731
Your Current Organism:
Nitrococcus mobilis
NCBI taxonomy Id: 314278
Other names: N. mobilis Nb-231, Nitrococcus mobilis Nb-231, Nitrococcus mobilis str. Nb-231, Nitrococcus mobilis strain Nb-231
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