STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR20778.1PilT protein-like; COG4374 Uncharacterized protein conserved in bacteria. (116 aa)    
Predicted Functional Partners:
EAR20779.1
Hypothetical protein; COG2002 Regulators of stationary/sporulation gene expression.
       0.674
EAR20776.1
Transcriptional regulator, XRE family protein; COG5606 Uncharacterized conserved small protein.
       0.516
EAR20777.1
COG4679 Phage-related protein.
       0.516
EAR22756.1
Latex allergen from Hevea brasiliensis; COG3621 Patatin.
  
     0.462
EAR22032.1
Hypothetical protein; COG0748 Putative heme iron utilization protein.
  
     0.426
Your Current Organism:
Nitrococcus mobilis
NCBI taxonomy Id: 314278
Other names: N. mobilis Nb-231, Nitrococcus mobilis Nb-231, Nitrococcus mobilis str. Nb-231, Nitrococcus mobilis strain Nb-231
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.