STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR20292.1COG1629 Outer membrane receptor proteins, mostly Fe transport. (710 aa)    
Predicted Functional Partners:
EAR23259.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
   
  
 0.894
EAR21796.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
 
  
 0.762
EAR20290.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
   
 0.713
EAR23268.1
2,3-dihydroxybenzoate-AMP ligase; COG1021 Peptide arylation enzymes.
   
  
 0.660
EAR22851.1
Probable tonB-dependent receptor; COG4206 Outer membrane cobalamin receptor protein.
  
   
 0.626
EAR20439.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
 0.624
EAR22088.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.615
EAR21789.1
Iron-uptake factor; COG3182 Uncharacterized iron-regulated membrane protein.
 
  
 0.610
EAR23322.1
TonB-like protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
 
 0.603
EAR21791.1
Putative ABC transporter ATP-binding protein; COG4615 ABC-type siderophore export system, fused ATPase and permease components.
 
  
 0.560
Your Current Organism:
Nitrococcus mobilis
NCBI taxonomy Id: 314278
Other names: N. mobilis Nb-231, Nitrococcus mobilis Nb-231, Nitrococcus mobilis str. Nb-231, Nitrococcus mobilis strain Nb-231
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.