STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR20446.1COG3293 Transposase and inactivated derivatives. (163 aa)    
Predicted Functional Partners:
EAR20445.1
COG3293 Transposase and inactivated derivatives.
     0.965
EAR20447.1
COG3293 Transposase and inactivated derivatives.
     0.908
EAR21990.1
Transposase, IS5 family, truncation; COG3293 Transposase and inactivated derivatives.
 
     0.842
EAR22938.1
Transposase, IS5 family, truncation; COG3293 Transposase and inactivated derivatives.
 
     0.837
EAR23161.1
Hypothetical protein; COG3293 Transposase and inactivated derivatives.
 
     0.773
EAR20735.1
Hypothetical protein; COG3293 Transposase and inactivated derivatives.
  
     0.772
EAR22604.1
COG3293 Transposase and inactivated derivatives.
 
     0.631
EAR20585.1
COG3293 Transposase and inactivated derivatives.
 
     0.616
EAR22206.1
COG3293 Transposase and inactivated derivatives.
  
     0.572
EAR20734.1
COG3293 Transposase and inactivated derivatives.
 
     0.471
Your Current Organism:
Nitrococcus mobilis
NCBI taxonomy Id: 314278
Other names: N. mobilis Nb-231, Nitrococcus mobilis Nb-231, Nitrococcus mobilis str. Nb-231, Nitrococcus mobilis strain Nb-231
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