STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR20458.1Putative L-asparaginase; COG1446 Asparaginase. (303 aa)    
Predicted Functional Partners:
EAR23480.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
  
 0.870
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
  0.869
EAR23028.1
Putative aminotransferase; COG0436 Aspartate/tyrosine/aromatic aminotransferase.
  
  
  0.700
EAR21134.1
COG0367 Asparagine synthase (glutamine-hydrolyzing).
     
 0.656
EAR22061.1
COG0367 Asparagine synthase (glutamine-hydrolyzing).
     
 0.654
EAR21267.1
COG0367 Asparagine synthase (glutamine-hydrolyzing).
     
 0.654
EAR23078.1
COG0367 Asparagine synthase (glutamine-hydrolyzing).
     
 0.654
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
       0.544
EAR22456.1
NAD binding site:Amine oxidase; COG1231 Monoamine oxidase.
  
  
  0.513
carB
Carbamoyl-phosphate synthase, large subunit, glutamine-dependent; COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); Belongs to the CarB family.
    
  0.451
Your Current Organism:
Nitrococcus mobilis
NCBI taxonomy Id: 314278
Other names: N. mobilis Nb-231, Nitrococcus mobilis Nb-231, Nitrococcus mobilis str. Nb-231, Nitrococcus mobilis strain Nb-231
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