STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR23479.1COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (462 aa)    
Predicted Functional Partners:
EAR23478.1
ABC transporter, inner membrane subunit; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.999
EAR23480.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
 0.999
EAR23477.1
COG0747 ABC-type dipeptide transport system, periplasmic component.
 
 0.985
EAR22754.1
Hypothetical protein.
  
     0.443
EAR20503.1
COG0642 Signal transduction histidine kinase.
  
  
 0.409
Your Current Organism:
Nitrococcus mobilis
NCBI taxonomy Id: 314278
Other names: N. mobilis Nb-231, Nitrococcus mobilis Nb-231, Nitrococcus mobilis str. Nb-231, Nitrococcus mobilis strain Nb-231
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.