STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGH80142.1COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase. (730 aa)    
Predicted Functional Partners:
rnr
Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
  
    0.648
AGH81312.1
3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.566
AGH82124.1
COG0825 Acetyl-CoA carboxylase alpha subunit.
  
  
 0.542
AGH80141.1
SNF2-like protein.
   
   0.491
AGH80415.1
Alpha/beta hydrolase fold protein; COG2267 Lysophospholipase.
  
 
 0.483
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
     
 0.474
groL
Chaperonin Cpn60, GroEL, large subunit of GroESL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
   
 
 0.461
AGH81115.1
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
 
 0.441
AGH80553.1
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
 
 0.429
pyrD
Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
    0.429
Your Current Organism:
Psychromonas sp. CNPT3
NCBI taxonomy Id: 314282
Other names: P. sp. CNPT3
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