STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argHBifunctional argininosuccinate lyase/N-acetylglutamate synthase; COG0165 Argininosuccinate lyase. (457 aa)    
Predicted Functional Partners:
argG
COG0137 Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
 
 
 0.999
AGH80426.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
  
 0.966
AGH81572.1
Aminotransferase AlaT; COG0436 Aspartate/tyrosine/aromatic aminotransferase.
  
 
 0.948
arcA
COG2235 Arginine deiminase.
    
 0.935
AGH81907.1
COG0015 Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
 0.933
aspA
COG1027 Aspartate ammonia-lyase.
     
 0.909
AGH81928.1
COG2902 NAD-specific glutamate dehydrogenase.
   
 
  0.901
argR
Arginine repressor; Regulates arginine biosynthesis genes.
  
  
 0.898
AGH81133.1
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.898
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate.
  
 0.883
Your Current Organism:
Psychromonas sp. CNPT3
NCBI taxonomy Id: 314282
Other names: P. sp. CNPT3
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