STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGH80358.1COG4967 Tfp pilus assembly protein PilV. (194 aa)    
Predicted Functional Partners:
AGH80359.1
Prepilin-type cleavage/methylation-like protein; COG4966 Tfp pilus assembly protein PilW.
 
  
 0.990
AGH80361.1
Type IV pilin biogenesis protein; COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1.
 
  
 0.982
AGH80360.1
Type IV pilus assembly protein PilX.
  
  
 0.950
AGH80363.1
COG4968 Tfp pilus assembly protein PilE.
 
  
 0.725
AGH80433.1
Pilus assembly protein.
 
  
 0.698
AGH80362.1
Methylation site containing protein; COG4970 Tfp pilus assembly protein FimT.
 
  
 0.651
AGH82492.1
Hypothetical protein.
  
     0.593
AGH81130.1
DNA repair ATPase.
  
     0.536
AGH81652.1
COG0670 Integral membrane protein, interacts with FtsH; Belongs to the BI1 family.
  
     0.535
AGH79991.1
COG4985 ABC-type phosphate transport system, auxiliary component.
  
    0.532
Your Current Organism:
Psychromonas sp. CNPT3
NCBI taxonomy Id: 314282
Other names: P. sp. CNPT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.