STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGH80360.1Type IV pilus assembly protein PilX. (154 aa)    
Predicted Functional Partners:
AGH80361.1
Type IV pilin biogenesis protein; COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1.
  
  
 0.956
AGH80359.1
Prepilin-type cleavage/methylation-like protein; COG4966 Tfp pilus assembly protein PilW.
  
  
 0.954
AGH80358.1
COG4967 Tfp pilus assembly protein PilV.
  
  
 0.950
AGH80363.1
COG4968 Tfp pilus assembly protein PilE.
  
  
 0.629
AGH80433.1
Pilus assembly protein.
  
  
 0.629
ispH
Hydroxymethylbutenyl pyrophosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
       0.462
lspA
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
       0.458
AGH80356.1
COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2.
       0.447
AGH80362.1
Methylation site containing protein; COG4970 Tfp pilus assembly protein FimT.
  
  
 0.402
AGH81937.1
Type IV pilin.
  
  
 0.402
Your Current Organism:
Psychromonas sp. CNPT3
NCBI taxonomy Id: 314282
Other names: P. sp. CNPT3
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