STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGH81038.1COG3562 Capsule polysaccharide export protein. (437 aa)    
Predicted Functional Partners:
AGH81037.1
COG3563 Capsule polysaccharide export protein.
   
 0.982
AGH81027.1
Hypothetical protein; COG3524 Capsule polysaccharide export protein.
 
 
 
 0.849
AGH81026.1
Polysialic acid transport ATP-binding protein KpsT; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
   
 0.829
AGH81025.1
Polysialic acid transport protein KpsM; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
   
 0.817
AGH81029.1
COG1596 Periplasmic protein involved in polysaccharide export.
 
   
 0.777
AGH82073.1
KpsF/GutQ family protein; COG0794 Predicted sugar phosphate isomerase involved in capsule formation.
     
 0.534
AGH81039.1
Lysine exporter protein LysE/YggA; COG1280 Putative threonine efflux protein.
       0.445
AGH81033.1
Type 12 methyltransferase; COG0438 Glycosyltransferase.
 
   
 0.431
Your Current Organism:
Psychromonas sp. CNPT3
NCBI taxonomy Id: 314282
Other names: P. sp. CNPT3
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.