STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGH81190.1Hypothetical protein; COG1196 Chromosome segregation ATPases. (673 aa)    
Predicted Functional Partners:
AGH81192.1
Hypothetical protein.
       0.800
AGH81191.1
Hypothetical protein; COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog.
       0.795
AGH80202.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
   0.504
AGH81189.1
ISCps3, transposase orfA; COG2963 Transposase and inactivated derivatives.
       0.499
AGH81193.1
Hypothetical protein.
       0.479
AGH80503.1
Cell division ABC transporter component permease FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.428
Your Current Organism:
Psychromonas sp. CNPT3
NCBI taxonomy Id: 314282
Other names: P. sp. CNPT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.