Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGH80234.1 | AGH80562.1 | PCNPT3_01460 | PCNPT3_03100 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor). | 0.904 |
AGH80234.1 | AGH81130.1 | PCNPT3_01460 | PCNPT3_05940 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | DNA repair ATPase. | 0.743 |
AGH80234.1 | AGH81288.1 | PCNPT3_01460 | PCNPT3_06750 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Hypothetical protein. | 0.791 |
AGH80234.1 | AGH81367.1 | PCNPT3_01460 | PCNPT3_07145 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Type IV pilus assembly TapZ. | 0.737 |
AGH80234.1 | AGH81565.1 | PCNPT3_01460 | PCNPT3_08135 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Type IV pilus assembly protein PilZ. | 0.523 |
AGH80234.1 | AGH81996.1 | PCNPT3_01460 | PCNPT3_10290 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Hypothetical protein; COG1516 Flagellin-specific chaperone FliS. | 0.792 |
AGH80234.1 | AGH82033.1 | PCNPT3_01460 | PCNPT3_10475 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Hypothetical protein. | 0.830 |
AGH80234.1 | AGH82324.1 | PCNPT3_01460 | PCNPT3_11940 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Sodium-type polar flagellar protein MotX; COG0790 FOG: TPR repeat, SEL1 subfamily. | 0.734 |
AGH80234.1 | motB | PCNPT3_01460 | PCNPT3_08060 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | COG1360 Flagellar motor protein. | 0.810 |
AGH80562.1 | AGH80234.1 | PCNPT3_03100 | PCNPT3_01460 | COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor). | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.904 |
AGH80562.1 | AGH81130.1 | PCNPT3_03100 | PCNPT3_05940 | COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor). | DNA repair ATPase. | 0.680 |
AGH80562.1 | AGH81288.1 | PCNPT3_03100 | PCNPT3_06750 | COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor). | Hypothetical protein. | 0.893 |
AGH80562.1 | AGH81367.1 | PCNPT3_03100 | PCNPT3_07145 | COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor). | Type IV pilus assembly TapZ. | 0.731 |
AGH80562.1 | AGH81565.1 | PCNPT3_03100 | PCNPT3_08135 | COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor). | Type IV pilus assembly protein PilZ. | 0.705 |
AGH80562.1 | AGH81996.1 | PCNPT3_03100 | PCNPT3_10290 | COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor). | Hypothetical protein; COG1516 Flagellin-specific chaperone FliS. | 0.981 |
AGH80562.1 | AGH82033.1 | PCNPT3_03100 | PCNPT3_10475 | COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor). | Hypothetical protein. | 0.839 |
AGH80562.1 | AGH82324.1 | PCNPT3_03100 | PCNPT3_11940 | COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor). | Sodium-type polar flagellar protein MotX; COG0790 FOG: TPR repeat, SEL1 subfamily. | 0.646 |
AGH80562.1 | motB | PCNPT3_03100 | PCNPT3_08060 | COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor). | COG1360 Flagellar motor protein. | 0.668 |
AGH81130.1 | AGH80234.1 | PCNPT3_05940 | PCNPT3_01460 | DNA repair ATPase. | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.743 |
AGH81130.1 | AGH80562.1 | PCNPT3_05940 | PCNPT3_03100 | DNA repair ATPase. | COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor). | 0.680 |
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