STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGH81631.1COG3516 Uncharacterized protein conserved in bacteria. (169 aa)    
Predicted Functional Partners:
AGH81630.1
COG3517 Uncharacterized protein conserved in bacteria.
 
 
 0.998
AGH81624.1
Type VI secretion protein; COG3522 Uncharacterized protein conserved in bacteria.
 
  
 0.981
AGH81632.1
Type VI secretion system effector; COG3157 Hemolysin-coregulated protein (uncharacterized).
 
 
 0.981
AGH81629.1
COG3518 Uncharacterized protein conserved in bacteria.
 
  
 0.980
AGH81616.1
vgrG protein; COG3501 Uncharacterized protein conserved in bacteria.
 
  
 0.968
AGH81623.1
DotU; COG3455 Uncharacterized protein conserved in bacteria.
 
  
 0.968
AGH81628.1
Type VI secretion protein; COG3519 Uncharacterized protein conserved in bacteria.
 
  
 0.964
AGH81625.1
COG3521 Uncharacterized protein conserved in bacteria.
 
  
 0.963
AGH81627.1
COG3520 Uncharacterized protein conserved in bacteria.
 
  
 0.963
AGH81619.1
COG3515 Uncharacterized protein conserved in bacteria.
 
  
 0.942
Your Current Organism:
Psychromonas sp. CNPT3
NCBI taxonomy Id: 314282
Other names: P. sp. CNPT3
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