Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGH80395.1 | AGH80813.1 | PCNPT3_02265 | PCNPT3_04355 | Hybrid sensory histidine kinase BarA; COG0642 Signal transduction histidine kinase. | Diguanylate cyclase; COG2199 FOG: GGDEF domain. | 0.762 |
| AGH80395.1 | AGH80839.1 | PCNPT3_02265 | PCNPT3_04485 | Hybrid sensory histidine kinase BarA; COG0642 Signal transduction histidine kinase. | cyclic-di-GMP regulatory protein; COG2199 FOG: GGDEF domain. | 0.967 |
| AGH80395.1 | AGH81103.1 | PCNPT3_02265 | PCNPT3_05805 | Hybrid sensory histidine kinase BarA; COG0642 Signal transduction histidine kinase. | Diguanylate cyclase; COG2199 FOG: GGDEF domain. | 0.818 |
| AGH80395.1 | AGH81227.1 | PCNPT3_02265 | PCNPT3_06435 | Hybrid sensory histidine kinase BarA; COG0642 Signal transduction histidine kinase. | Diguanylate phosphodiesterase; COG2200 FOG: EAL domain. | 0.753 |
| AGH80395.1 | AGH81702.1 | PCNPT3_02265 | PCNPT3_08820 | Hybrid sensory histidine kinase BarA; COG0642 Signal transduction histidine kinase. | Aerobic respiration control sensor protein ArcB; COG0642 Signal transduction histidine kinase. | 0.997 |
| AGH80395.1 | AGH81826.1 | PCNPT3_02265 | PCNPT3_09440 | Hybrid sensory histidine kinase BarA; COG0642 Signal transduction histidine kinase. | Metal dependent phosphohydrolase; COG2206 HD-GYP domain. | 0.426 |
| AGH80395.1 | AGH81970.1 | PCNPT3_02265 | PCNPT3_10160 | Hybrid sensory histidine kinase BarA; COG0642 Signal transduction histidine kinase. | Hypothetical protein; COG2199 FOG: GGDEF domain. | 0.759 |
| AGH80395.1 | AGH82069.1 | PCNPT3_02265 | PCNPT3_10655 | Hybrid sensory histidine kinase BarA; COG0642 Signal transduction histidine kinase. | Regulatory protein CsrD; COG2199 FOG: GGDEF domain. | 0.972 |
| AGH80395.1 | AGH82140.1 | PCNPT3_02265 | PCNPT3_11020 | Hybrid sensory histidine kinase BarA; COG0642 Signal transduction histidine kinase. | Diguanylate cyclase; COG2199 FOG: GGDEF domain. | 0.838 |
| AGH80395.1 | AGH82151.1 | PCNPT3_02265 | PCNPT3_11075 | Hybrid sensory histidine kinase BarA; COG0642 Signal transduction histidine kinase. | Diguanylate cyclase; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. | 0.803 |
| AGH80813.1 | AGH80395.1 | PCNPT3_04355 | PCNPT3_02265 | Diguanylate cyclase; COG2199 FOG: GGDEF domain. | Hybrid sensory histidine kinase BarA; COG0642 Signal transduction histidine kinase. | 0.762 |
| AGH80813.1 | AGH80839.1 | PCNPT3_04355 | PCNPT3_04485 | Diguanylate cyclase; COG2199 FOG: GGDEF domain. | cyclic-di-GMP regulatory protein; COG2199 FOG: GGDEF domain. | 0.713 |
| AGH80813.1 | AGH81227.1 | PCNPT3_04355 | PCNPT3_06435 | Diguanylate cyclase; COG2199 FOG: GGDEF domain. | Diguanylate phosphodiesterase; COG2200 FOG: EAL domain. | 0.775 |
| AGH80813.1 | AGH81702.1 | PCNPT3_04355 | PCNPT3_08820 | Diguanylate cyclase; COG2199 FOG: GGDEF domain. | Aerobic respiration control sensor protein ArcB; COG0642 Signal transduction histidine kinase. | 0.805 |
| AGH80813.1 | AGH81826.1 | PCNPT3_04355 | PCNPT3_09440 | Diguanylate cyclase; COG2199 FOG: GGDEF domain. | Metal dependent phosphohydrolase; COG2206 HD-GYP domain. | 0.661 |
| AGH80813.1 | AGH82069.1 | PCNPT3_04355 | PCNPT3_10655 | Diguanylate cyclase; COG2199 FOG: GGDEF domain. | Regulatory protein CsrD; COG2199 FOG: GGDEF domain. | 0.809 |
| AGH80813.1 | AGH82151.1 | PCNPT3_04355 | PCNPT3_11075 | Diguanylate cyclase; COG2199 FOG: GGDEF domain. | Diguanylate cyclase; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. | 0.809 |
| AGH80839.1 | AGH80395.1 | PCNPT3_04485 | PCNPT3_02265 | cyclic-di-GMP regulatory protein; COG2199 FOG: GGDEF domain. | Hybrid sensory histidine kinase BarA; COG0642 Signal transduction histidine kinase. | 0.967 |
| AGH80839.1 | AGH80813.1 | PCNPT3_04485 | PCNPT3_04355 | cyclic-di-GMP regulatory protein; COG2199 FOG: GGDEF domain. | Diguanylate cyclase; COG2199 FOG: GGDEF domain. | 0.713 |
| AGH80839.1 | AGH81103.1 | PCNPT3_04485 | PCNPT3_05805 | cyclic-di-GMP regulatory protein; COG2199 FOG: GGDEF domain. | Diguanylate cyclase; COG2199 FOG: GGDEF domain. | 0.665 |
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