STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGH82495.1Hypothetical protein; COG1561 Uncharacterized stress-induced protein. (287 aa)    
Predicted Functional Partners:
AGH80588.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
  
    0.746
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
  
    0.631
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
  
    0.597
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
  
 0.496
AGH82494.1
Hypothetical protein; COG1639 Predicted signal transduction protein.
       0.434
AGH82496.1
COG3171 Uncharacterized protein conserved in bacteria.
       0.414
Your Current Organism:
Psychromonas sp. CNPT3
NCBI taxonomy Id: 314282
Other names: P. sp. CNPT3
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