EAR07568.1 protein (Reinekea blandensis) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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protein homology

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Score

EAR07568.1

Sporulation initiation inhibitor protein Soj; COG1192 ATPases involved in chromosome partitioning. (279 aa)

Predicted Functional Partners:

EAR11229.1

0.975

EAR07575.1

0.793

EAR07571.1

0.787

EAR07569.1

0.773

EAR07570.1

0.773

EAR07572.1

0.773

EAR07573.1

0.773

EAR07574.1

0.773

EAR07576.1

0.773

EAR07577.1

0.773

Your Current Organism:

Reinekea blandensis

NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAR07568.1	EAR07569.1	MED297_00065	MED297_00070	Sporulation initiation inhibitor protein Soj; COG1192 ATPases involved in chromosome partitioning.	Hypothetical protein; COG1475 Predicted transcriptional regulators.	0.773
EAR07568.1	EAR07570.1	MED297_00065	MED297_00075	Sporulation initiation inhibitor protein Soj; COG1192 ATPases involved in chromosome partitioning.	Hypothetical protein; COG1349 Transcriptional regulators of sugar metabolism.	0.773
EAR07568.1	EAR07571.1	MED297_00065	MED297_00080	Sporulation initiation inhibitor protein Soj; COG1192 ATPases involved in chromosome partitioning.	Hypothetical protein; COG1112 Superfamily I DNA and RNA helicases and helicase subunits.	0.787
EAR07568.1	EAR07572.1	MED297_00065	MED297_00085	Sporulation initiation inhibitor protein Soj; COG1192 ATPases involved in chromosome partitioning.	Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.	0.773
EAR07568.1	EAR07573.1	MED297_00065	MED297_00090	Sporulation initiation inhibitor protein Soj; COG1192 ATPases involved in chromosome partitioning.	Hypothetical protein.	0.773
EAR07568.1	EAR07574.1	MED297_00065	MED297_00095	Sporulation initiation inhibitor protein Soj; COG1192 ATPases involved in chromosome partitioning.	Hypothetical protein.	0.773
EAR07568.1	EAR07575.1	MED297_00065	MED297_00100	Sporulation initiation inhibitor protein Soj; COG1192 ATPases involved in chromosome partitioning.	Hypothetical protein.	0.793
EAR07568.1	EAR07576.1	MED297_00065	MED297_00105	Sporulation initiation inhibitor protein Soj; COG1192 ATPases involved in chromosome partitioning.	Hypothetical protein; COG1196 Chromosome segregation ATPases.	0.773
EAR07568.1	EAR07577.1	MED297_00065	MED297_00110	Sporulation initiation inhibitor protein Soj; COG1192 ATPases involved in chromosome partitioning.	Hypothetical protein.	0.773
EAR07568.1	EAR11229.1	MED297_00065	MED297_20117	Sporulation initiation inhibitor protein Soj; COG1192 ATPases involved in chromosome partitioning.	ParB-like partition protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.	0.975
EAR07569.1	EAR07568.1	MED297_00070	MED297_00065	Hypothetical protein; COG1475 Predicted transcriptional regulators.	Sporulation initiation inhibitor protein Soj; COG1192 ATPases involved in chromosome partitioning.	0.773
EAR07569.1	EAR07570.1	MED297_00070	MED297_00075	Hypothetical protein; COG1475 Predicted transcriptional regulators.	Hypothetical protein; COG1349 Transcriptional regulators of sugar metabolism.	0.773
EAR07569.1	EAR07571.1	MED297_00070	MED297_00080	Hypothetical protein; COG1475 Predicted transcriptional regulators.	Hypothetical protein; COG1112 Superfamily I DNA and RNA helicases and helicase subunits.	0.773
EAR07569.1	EAR07572.1	MED297_00070	MED297_00085	Hypothetical protein; COG1475 Predicted transcriptional regulators.	Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.	0.773
EAR07569.1	EAR07573.1	MED297_00070	MED297_00090	Hypothetical protein; COG1475 Predicted transcriptional regulators.	Hypothetical protein.	0.773
EAR07569.1	EAR07574.1	MED297_00070	MED297_00095	Hypothetical protein; COG1475 Predicted transcriptional regulators.	Hypothetical protein.	0.773
EAR07569.1	EAR07575.1	MED297_00070	MED297_00100	Hypothetical protein; COG1475 Predicted transcriptional regulators.	Hypothetical protein.	0.773
EAR07569.1	EAR07576.1	MED297_00070	MED297_00105	Hypothetical protein; COG1475 Predicted transcriptional regulators.	Hypothetical protein; COG1196 Chromosome segregation ATPases.	0.773
EAR07569.1	EAR07577.1	MED297_00070	MED297_00110	Hypothetical protein; COG1475 Predicted transcriptional regulators.	Hypothetical protein.	0.773
EAR07570.1	EAR07568.1	MED297_00075	MED297_00065	Hypothetical protein; COG1349 Transcriptional regulators of sugar metabolism.	Sporulation initiation inhibitor protein Soj; COG1192 ATPases involved in chromosome partitioning.	0.773

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Network Stats

number of nodes:

6

number of edges:

12

average node degree:

4

avg. local clustering coefficient:

0.9

expected number of edges:

5

PPI enrichment p-value:

0.0064

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006526

Arginine biosynthetic process

9 of 14

2.76

9.81

2.88e-20

GO:0046394

Carboxylic acid biosynthetic process

10 of 235

1.58

3.38

2.09e-13

GO:0006591

Ornithine metabolic process

3 of 3

2.95

3.17

1.57e-06

GO:0042450

Arginine biosynthetic process via ornithine

2 of 2

2.95

1.87

0.00040

GO:1901566

Organonitrogen compound biosynthetic process

10 of 576

1.19

1.75

5.53e-10

(more ...)

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0003991

Acetylglutamate kinase activity

2 of 2

2.95

1.36

0.0035

GO:0008483

Transaminase activity

2 of 24

1.87

0.7

0.0464

GO:0036094

Small molecule binding

8 of 1136

0.8

0.6

0.0035

GO:0016740

Transferase activity

7 of 1222

0.71

0.46

0.0175

GO:0043168

Anion binding

6 of 1023

0.72

0.41

0.0464

(more ...)

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005737

Cytoplasm

10 of 2163

0.62

0.51

0.00038

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:7435

Arginine biosynthetic process

9 of 12

2.83

10.12

1.29e-20

CL:7439

Arginine biosynthesis

6 of 6

2.95

6.91

1.07e-13

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00220

Arginine biosynthesis

9 of 27

2.47

8.59

2.98e-19

map01210

2-Oxocarboxylic acid metabolism

6 of 52

2.01

3.96

6.63e-10

map01230

Biosynthesis of amino acids

9 of 187

1.63

3.47

1.50e-12

map01110

Biosynthesis of secondary metabolites

9 of 778

1.01

1.19

2.09e-07

map00250

Alanine, aspartate and glutamate metabolism

2 of 41

1.64

0.82

0.0227

(more ...)

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0005622

Intracellular

9 of 2422

0.52

0.33

0.0406

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0055

Arginine biosynthesis

5 of 9

2.7

5.02

2.68e-10

KW-0963

Cytoplasm

5 of 265

1.23

1.13

0.00044

KW-0808

Transferase

6 of 489

1.04

0.93

0.00044

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