STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR07240.1Hypothetical protein; COG0354 Predicted aminomethyltransferase related to GcvT. (254 aa)    
Predicted Functional Partners:
EAR07241.1
Hypothetical protein.
       0.791
nfuA
Thioredoxin-like protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
  
 
 0.625
EAR08662.1
Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family.
  
   
 0.619
EAR08473.1
COG1286 Uncharacterized membrane protein, required for colicin V production.
  
     0.591
EAR08412.1
Generic methyl-transferase; COG0500 SAM-dependent methyltransferases.
  
     0.572
EAR08541.1
COG2976 Uncharacterized protein conserved in bacteria.
  
     0.571
EAR07238.1
Hypothetical protein.
 
     0.562
EAR08983.1
COG3085 Uncharacterized protein conserved in bacteria.
  
     0.556
EAR07239.1
Hypothetical protein.
       0.527
EAR10895.1
COG2960 Uncharacterized protein conserved in bacteria.
  
     0.505
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.