STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR08094.1Polyheme membrane-associated cytochrome c. (370 aa)    
Predicted Functional Partners:
EAR10564.1
Regulatory P domain of the subtilisin-like proprotein convertase and other protease.
  
 
 0.910
EAR10026.1
Endo-1,4-beta-glucanase; COG2730 Endoglucanase.
    
 0.874
EAR08797.1
Levanase; COG1621 Beta-fructosidases (levanase/invertase); Belongs to the glycosyl hydrolase 32 family.
    
 0.839
EAR11109.1
Putative alpha amylase; COG0366 Glycosidases; Belongs to the glycosyl hydrolase 13 family.
    
 0.828
EAR08095.1
Cytochrome c family protein.
       0.784
EAR08096.1
Hydrogenase, b-type cytochrome subunit, putative; COG4117 Thiosulfate reductase cytochrome B subunit (membrane anchoring protein).
       0.718
EAR08678.1
COG1640 4-alpha-glucanotransferase.
    
 0.687
EAR09401.1
Hypothetical protein; COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases; Belongs to the glycosyl hydrolase 31 family.
    
  0.661
EAR09607.1
Glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
    
 0.659
EAR07682.1
Hypothetical protein; COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase.
     
 0.646
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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