STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR08150.1Membrane protein; COG1073 Hydrolases of the alpha/beta superfamily. (351 aa)    
Predicted Functional Partners:
EAR08146.1
Hypothetical protein; COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
     0.910
EAR07916.1
COG1216 Predicted glycosyltransferases.
   
 
 0.729
EAR07917.1
Truncated O-antigen biosynthesis protein; COG1216 Predicted glycosyltransferases.
  
 
 0.726
EAR07921.1
COG1216 Predicted glycosyltransferases.
   
 
 0.718
EAR09386.1
COG0438 Glycosyltransferase.
   
 
 0.716
EAR07394.1
Hypothetical protein; COG0438 Glycosyltransferase.
   
 
 0.716
EAR08858.1
Hypothetical protein; COG0438 Glycosyltransferase.
   
 
 0.716
EAR10796.1
COG0438 Glycosyltransferase.
   
 
 0.716
EAR10164.1
Putative lipopolysaccharide core biosynthesis mannosyltransferase; COG0438 Glycosyltransferase.
   
 
 0.716
EAR08734.1
SqdX; COG0438 Glycosyltransferase.
   
 
 0.716
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.