STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR08158.1Glutamine ABC transporter, ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component. (249 aa)    
Predicted Functional Partners:
EAR08159.1
COG0765 ABC-type amino acid transport system, permease component.
 0.999
EAR08160.1
COG0765 ABC-type amino acid transport system, permease component.
 0.999
EAR08161.1
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
 0.982
EAR07476.1
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
 0.973
EAR07478.1
COG4160 ABC-type arginine/histidine transport system, permease component.
 
 0.941
EAR10899.1
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
 
 0.921
EAR11241.1
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
 0.918
EAR07320.1
General L-amino ABC transporter binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 0.906
EAR10534.1
Putative ABC transporter, permease protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
      0.899
EAR11452.1
ABC transporter, ATP-binding/permease protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
     
0.899
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.