STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR10424.1COG0840 Methyl-accepting chemotaxis protein. (491 aa)    
Predicted Functional Partners:
EAR10425.1
Aerotaxis receptor; COG2202 FOG: PAS/PAC domain.
 0.988
EAR08839.1
Hypothetical 1041 kDa protein in hypE 3'region; COG2199 FOG: GGDEF domain.
  
 0.982
EAR07555.1
COG0643 Chemotaxis protein histidine kinase and related kinases.
 
 0.971
EAR07735.1
COG0643 Chemotaxis protein histidine kinase and related kinases.
 
 0.960
EAR09408.1
CheA Signal Transduction Histidine Kinases (STHK); COG0643 Chemotaxis protein histidine kinase and related kinases.
 
 0.960
EAR10093.1
COG0643 Chemotaxis protein histidine kinase and related kinases; ATP-binding region, ATPase-like; Signal transducing histidine kinase, homodimeric; Hpt.
 
 0.960
EAR08975.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
  
 0.953
EAR09415.1
COG0835 Chemotaxis signal transduction protein.
 
 0.943
EAR10095.1
COG0835 Chemotaxis signal transduction protein.
 
 0.935
EAR09436.1
COG0835 Chemotaxis signal transduction protein.
 
 0.931
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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