Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAR07317.1 | EAR08005.1 | MED297_12232 | MED297_15585 | GGDEF family protein; COG0642 Signal transduction histidine kinase. | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.912 |
| EAR07317.1 | EAR08006.1 | MED297_12232 | MED297_15590 | GGDEF family protein; COG0642 Signal transduction histidine kinase. | Flagellar motor switch protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. | 0.930 |
| EAR07317.1 | EAR08839.1 | MED297_12232 | MED297_04197 | GGDEF family protein; COG0642 Signal transduction histidine kinase. | Hypothetical 1041 kDa protein in hypE 3'region; COG2199 FOG: GGDEF domain. | 0.996 |
| EAR07317.1 | EAR09148.1 | MED297_12232 | MED297_17438 | GGDEF family protein; COG0642 Signal transduction histidine kinase. | Hypothetical tryptophan-rich sensor protein; COG0642 Signal transduction histidine kinase. | 0.997 |
| EAR07317.1 | EAR09406.1 | MED297_12232 | MED297_02262 | GGDEF family protein; COG0642 Signal transduction histidine kinase. | COG0784 FOG: CheY-like receiver. | 0.924 |
| EAR07317.1 | EAR09407.1 | MED297_12232 | MED297_02267 | GGDEF family protein; COG0642 Signal transduction histidine kinase. | Chemotaxis protein; COG4108 Peptide chain release factor RF-3. | 0.951 |
| EAR07317.1 | EAR09408.1 | MED297_12232 | MED297_02272 | GGDEF family protein; COG0642 Signal transduction histidine kinase. | CheA Signal Transduction Histidine Kinases (STHK); COG0643 Chemotaxis protein histidine kinase and related kinases. | 0.937 |
| EAR07317.1 | EAR10613.1 | MED297_12232 | MED297_11375 | GGDEF family protein; COG0642 Signal transduction histidine kinase. | PAS; COG0642 Signal transduction histidine kinase. | 0.998 |
| EAR07317.1 | EAR11317.1 | MED297_12232 | MED297_20557 | GGDEF family protein; COG0642 Signal transduction histidine kinase. | Probable sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase. | 0.998 |
| EAR08005.1 | EAR07317.1 | MED297_15585 | MED297_12232 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | GGDEF family protein; COG0642 Signal transduction histidine kinase. | 0.912 |
| EAR08005.1 | EAR08006.1 | MED297_15585 | MED297_15590 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Flagellar motor switch protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. | 0.999 |
| EAR08005.1 | EAR08839.1 | MED297_15585 | MED297_04197 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Hypothetical 1041 kDa protein in hypE 3'region; COG2199 FOG: GGDEF domain. | 0.965 |
| EAR08005.1 | EAR09148.1 | MED297_15585 | MED297_17438 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Hypothetical tryptophan-rich sensor protein; COG0642 Signal transduction histidine kinase. | 0.917 |
| EAR08005.1 | EAR09404.1 | MED297_15585 | MED297_02252 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Flagellar number regulator FleN; COG0455 ATPases involved in chromosome partitioning. | 0.906 |
| EAR08005.1 | EAR09406.1 | MED297_15585 | MED297_02262 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | COG0784 FOG: CheY-like receiver. | 0.926 |
| EAR08005.1 | EAR09407.1 | MED297_15585 | MED297_02267 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Chemotaxis protein; COG4108 Peptide chain release factor RF-3. | 0.912 |
| EAR08005.1 | EAR09408.1 | MED297_15585 | MED297_02272 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | CheA Signal Transduction Histidine Kinases (STHK); COG0643 Chemotaxis protein histidine kinase and related kinases. | 0.776 |
| EAR08005.1 | EAR10613.1 | MED297_15585 | MED297_11375 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | PAS; COG0642 Signal transduction histidine kinase. | 0.940 |
| EAR08005.1 | EAR11317.1 | MED297_15585 | MED297_20557 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Probable sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase. | 0.974 |
| EAR08006.1 | EAR07317.1 | MED297_15590 | MED297_12232 | Flagellar motor switch protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. | GGDEF family protein; COG0642 Signal transduction histidine kinase. | 0.930 |
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