STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR09413.1Cobyrinic acid a,c-diamide synthase; COG1192 ATPases involved in chromosome partitioning. (255 aa)    
Predicted Functional Partners:
EAR11229.1
ParB-like partition protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
 
 0.982
EAR09414.1
Protein containing CheW-like domain.
 
 
 0.891
EAR09412.1
COG1360 Flagellar motor protein.
  
    0.797
EAR09411.1
COG1291 Flagellar motor component.
  
    0.778
EAR11354.1
COG4206 Outer membrane cobalamin receptor protein.
    
 
 0.772
EAR09407.1
Chemotaxis protein; COG4108 Peptide chain release factor RF-3.
 
    0.744
EAR09663.1
Cell division protein FtsK; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
  
  
 0.591
dnaA
Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 0.586
cheB-2
Chemotaxis-specific methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
    0.578
EAR09415.1
COG0835 Chemotaxis signal transduction protein.
 
   0.578
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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