STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR09456.1COG2089 Sialic acid synthase. (354 aa)    
Predicted Functional Partners:
EAR09455.1
COG0381 UDP-N-acetylglucosamine 2-epimerase.
 
 0.996
EAR09459.1
COG1083 CMP-N-acetylneuraminic acid synthetase.
 
 
 0.988
EAR09457.1
COG0110 Acetyltransferase (isoleucine patch superfamily).
     0.980
EAR09454.1
COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.974
EAR09458.1
Nucleoside-diphosphate-sugar pyrophosphorylase; COG0517 FOG: CBS domain.
 
  
 0.973
EAR09453.1
Probable nucleotide sugar dehydratase; COG0451 Nucleoside-diphosphate-sugar epimerases.
 
  
 0.958
EAR09461.1
COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
  
 0.820
EAR09776.1
Phosphatase KdsC; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.
  
 0.779
EAR09460.1
COG0001 Glutamate-1-semialdehyde aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.700
EAR09450.1
COG1256 Flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family.
  
  
 0.695
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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