STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR09196.1COG0845 Membrane-fusion protein. (328 aa)    
Predicted Functional Partners:
EAR09197.1
COG1538 Outer membrane protein.
 0.993
EAR09195.1
Hypothetical protein; COG0842 ABC-type multidrug transport system, permease component.
  
 0.958
EAR09194.1
Hypothetical protein; COG0842 ABC-type multidrug transport system, permease component.
  
 0.957
EAR11087.1
COG1538 Outer membrane protein.
 
 0.932
EAR10696.1
Putative multidrug resistance protein (substrate binding lipoprotein); COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.800
EAR10534.1
Putative ABC transporter, permease protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
  
 0.693
EAR10697.1
Transporter, AcrB/D/F family protein; COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.642
EAR08525.1
AcrB/AcrD/AcrF family protein; COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.640
EAR10532.1
Putative substate-binding protein involved in drug resistance; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.584
EAR08524.1
Secretion protein HlyD; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
0.538
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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