STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR10002.1Peptidase M24; COG0006 Xaa-Pro aminopeptidase. (426 aa)    
Predicted Functional Partners:
EAR10001.1
COG0160 4-aminobutyrate aminotransferase and related aminotransferases; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.935
EAR10003.1
COG1012 NAD-dependent aldehyde dehydrogenases.
 
 
 0.870
EAR10000.1
Peptidase M20D, amidohydrolase; COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase.
 
  
 0.865
EAR10108.1
Succinylglutamate desuccinylase/aspartoacylase; COG3608 Predicted deacylase.
    
 0.821
EAR08332.1
L-proline 4-hydroxylase.
    
 0.792
EAR10201.1
Phytanoyl-CoA dioxygenase; COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin.
    
 0.792
EAR09267.1
Aminoacyl-histidine dipeptidase precursor; COG2195 Di- and tripeptidases.
  
 
 0.723
EAR07296.1
COG0457 FOG: TPR repeat.
  
   
 0.698
EAR09257.1
Ectoine synthasE.
 
  
  0.654
EAR07294.1
COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain.
 
  
  0.602
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.