STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR10036.1COG2071 Predicted glutamine amidotransferases. (247 aa)    
Predicted Functional Partners:
EAR09564.1
COG0174 Glutamine synthetase.
  
 
 0.919
EAR10034.1
Hypothetical protein; COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog.
     0.909
EAR10995.1
COG0067 Glutamate synthase domain 1.
    
  0.855
EAR11077.1
Glutamate synthase, large subunit, GOGAT; COG0067 Glutamate synthase domain 1.
    
  0.855
EAR10052.1
Delta 1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
  0.846
hutG
Probable arginase family protein; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.
    
 0.769
EAR09182.1
COG0665 Glycine/D-amino acid oxidases (deaminating).
  
  
 0.654
EAR09256.1
4-aminobutyrate aminotransferase and related aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.649
EAR10001.1
COG0160 4-aminobutyrate aminotransferase and related aminotransferases; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.649
EAR10214.1
Pseudouridine synthase (makes pseudouridine2605 in 23 S RNA); COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family.
      0.630
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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