STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR10040.1Probable chemotaxis transducer; COG0840 Methyl-accepting chemotaxis protein. (542 aa)    
Predicted Functional Partners:
EAR08839.1
Hypothetical 1041 kDa protein in hypE 3'region; COG2199 FOG: GGDEF domain.
  
 0.982
EAR07555.1
COG0643 Chemotaxis protein histidine kinase and related kinases.
 
 0.979
EAR07735.1
COG0643 Chemotaxis protein histidine kinase and related kinases.
 
 0.959
EAR09408.1
CheA Signal Transduction Histidine Kinases (STHK); COG0643 Chemotaxis protein histidine kinase and related kinases.
 
 0.959
EAR10093.1
COG0643 Chemotaxis protein histidine kinase and related kinases; ATP-binding region, ATPase-like; Signal transducing histidine kinase, homodimeric; Hpt.
 
 0.959
EAR08975.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
  
 0.953
EAR09415.1
COG0835 Chemotaxis signal transduction protein.
 
 0.949
EAR10095.1
COG0835 Chemotaxis signal transduction protein.
 
 0.943
EAR07941.1
COG0835 Chemotaxis signal transduction protein.
 
 0.940
EAR09436.1
COG0835 Chemotaxis signal transduction protein.
 
 0.936
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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