STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR08801.1COG1741 Pirin-related protein; Belongs to the pirin family. (233 aa)    
Predicted Functional Partners:
EAR10196.1
Hypothetical protein.
 
  
 0.642
EAR08802.1
Hypothetical protein yieF; COG0431 Predicted flavoprotein.
       0.622
EAR07341.1
DoxD-like family protein; COG2259 Predicted membrane protein.
 
  
 0.487
EAR11339.1
Flavin dependant oxidoreductase; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
  
  
 0.413
EAR10681.1
Putative oxidoreductase; COG5126 Ca2+-binding protein (EF-Hand superfamily).
 
      0.409
EAR08800.1
Predicted thiol oxidoreductase; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
       0.404
EAR08803.1
COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein.
       0.400
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.