Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAR07489.1 | EAR07490.1 | MED297_09621 | MED297_09626 | COG1539 Dihydroneopterin aldolase. | Short chain dehydrogenase/reductase family protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.864 |
EAR07489.1 | EAR07491.1 | MED297_09621 | MED297_09631 | COG1539 Dihydroneopterin aldolase. | Hypothetical protein. | 0.418 |
EAR07490.1 | EAR07489.1 | MED297_09626 | MED297_09621 | Short chain dehydrogenase/reductase family protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | COG1539 Dihydroneopterin aldolase. | 0.864 |
EAR07490.1 | EAR07491.1 | MED297_09626 | MED297_09631 | Short chain dehydrogenase/reductase family protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.426 |
EAR07491.1 | EAR07489.1 | MED297_09631 | MED297_09621 | Hypothetical protein. | COG1539 Dihydroneopterin aldolase. | 0.418 |
EAR07491.1 | EAR07490.1 | MED297_09631 | MED297_09626 | Hypothetical protein. | Short chain dehydrogenase/reductase family protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.426 |
EAR07491.1 | EAR07492.1 | MED297_09631 | MED297_09636 | Hypothetical protein. | Hypothetical protein; COG0730 Predicted permeases. | 0.485 |
EAR07492.1 | EAR07491.1 | MED297_09636 | MED297_09631 | Hypothetical protein; COG0730 Predicted permeases. | Hypothetical protein. | 0.485 |