STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR10885.1COG1653 ABC-type sugar transport system, periplasmic component. (409 aa)    
Predicted Functional Partners:
EAR11011.1
COG0395 ABC-type sugar transport system, permease component.
 
 0.928
EAR11010.1
COG1175 ABC-type sugar transport systems, permease components.
 
 0.921
EAR11012.1
COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.776
EAR08318.1
Putative sugar ABC transporter (permease); COG0395 ABC-type sugar transport system, permease component.
  
 0.766
EAR08317.1
COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
 0.713
ugpC
Glycerol-3-phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
  
 0.713
EAR08679.1
Sugar ABC transportor, ATP-binding protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
 0.713
EAR09390.1
COG0395 ABC-type sugar transport system, permease component.
  
 0.694
EAR10194.1
ABC transporter, membrane spanning protein (sugar); COG0395 ABC-type sugar transport system, permease component.
  
 0.683
EAR07683.1
COG0395 ABC-type sugar transport system, permease component.
  
 0.673
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.