STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR10610.1Hypothetical protein; COG1510 Predicted transcriptional regulators; Belongs to the GbsR family. (185 aa)    
Predicted Functional Partners:
EAR10608.1
COG1294 Cytochrome bd-type quinol oxidase, subunit 2.
 
   
 0.893
EAR10609.1
COG1271 Cytochrome bd-type quinol oxidase, subunit 1.
 
  
 0.878
EAR10607.1
COG1960 Acyl-CoA dehydrogenases.
 
     0.507
EAR10611.1
ABC transporter, membrane spanning protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
       0.502
EAR11462.1
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.457
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.