STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR10653.1COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. (238 aa)    
Predicted Functional Partners:
EAR10654.1
Hypothetical protein; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
       0.773
EAR10652.1
COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
       0.499
EAR09929.1
SPFH domain/Band 7 family protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
  
    0.415
EAR09930.1
SPFH domain/Band 7 family protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
  
    0.415
EAR10655.1
long-chain-fatty-acid--CoA ligase (long-chain acyl-CoA synthetase) (LACS); COG1022 Long-chain acyl-CoA synthetases (AMP-forming).
       0.415
EAR09594.1
HflK; HflC and HflK could encode or regulate a protease.
  
    0.415
EAR09595.1
HflC protein; HflC and HflK could regulate a protease.
  
    0.415
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.