STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR10674.1Hypothetical protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components. (318 aa)    
Predicted Functional Partners:
EAR10058.1
COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.837
EAR11317.1
Probable sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase.
    
 0.792
EAR09148.1
Hypothetical tryptophan-rich sensor protein; COG0642 Signal transduction histidine kinase.
    
  0.786
EAR10056.1
COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
  
 
 0.732
EAR09124.1
ABC transporter, membrane spanning protein; COG1175 ABC-type sugar transport systems, permease components.
  
 
 0.732
EAR10673.1
Putative sensor protein; COG2199 FOG: GGDEF domain.
    
  0.712
EAR10055.1
Putative nitrate ABC transporter, ATP-binding protein; COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
  
 
 0.711
EAR10726.1
ABC transporter, ATPase subunit; COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
  
 
 0.711
EAR09126.1
ABC transporter, nucleotide binding/ATPase protein (nitrate); COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
  
 
 0.711
EAR10725.1
ABC transporter, inner membrane subunit; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
  
 
 0.704
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.