STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR07319.1Hypothetical protein. (93 aa)    
Predicted Functional Partners:
EAR07526.1
COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
    
 0.876
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.828
EAR10587.1
Nitrite reductase; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
   
  0.822
EAR09524.1
Rieske [2Fe-2S] region; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
   
  0.822
EAR09351.1
Hypothetical protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
   
  0.822
EAR09444.1
COG4786 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.684
EAR08207.1
Hypothetical protein.
 
     0.579
EAR07320.1
General L-amino ABC transporter binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
    
  0.572
EAR10686.1
COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
    
 0.523
nqrF
Na(+)-translocating NADH-quinone reductase subunit F; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway.
    
 0.503
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.