STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR09603.1Hypothetical protein. (144 aa)    
Predicted Functional Partners:
EAR09605.1
Hypothetical protein; COG0714 MoxR-like ATPases.
  
 
 0.860
EAR09604.1
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
  
  
 0.814
EAR09600.1
Hypothetical protein.
     
 0.800
EAR09601.1
COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
     
 0.799
EAR09602.1
COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
       0.794
EAR07987.1
SAM (and some other nucleotide) binding motif:TPR repeat; COG0457 FOG: TPR repeat.
   
 0.548
EAR07397.1
Putative glycosyltransferase; COG0500 SAM-dependent methyltransferases.
   
 0.497
EAR09606.1
Nex18 Symbiotically induced conserved protein; COG2335 Secreted and surface protein containing fasciclin-like repeats.
  
    0.480
cmoB
Methyltransferase, putative; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.
   
 0.466
EAR07825.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
  
 
 0.458
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.