STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR10149.1K+-dependent Na+/Ca+ exchanger related-protein; COG0530 Ca2+/Na+ antiporter. (321 aa)    
Predicted Functional Partners:
EAR10148.1
COG0794 Predicted sugar phosphate isomerase involved in capsule formation.
    
 0.888
EAR10145.1
COG1137 ABC-type (unclassified) transport system, ATPase component.
     
 0.811
EAR10146.1
COG1934 Uncharacterized protein conserved in bacteria.
     
 0.808
EAR10147.1
COG3117 Uncharacterized protein conserved in bacteria.
     
 0.798
EAR10144.1
RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
       0.646
EAR10150.1
COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component.
       0.530
EAR07641.1
Hypothetical protein; COG2907 Predicted NAD/FAD-binding protein.
   
    0.465
EAR10139.1
Magnesium transporter; Acts as a magnesium transporter.
   
   0.452
EAR10143.1
COG1544 Ribosome-associated protein Y (PSrp-1).
     
 0.430
EAR10142.1
Nitrogen regulatory IIA protein; COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
     
 0.427
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.