STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR10174.1COG1296 Predicted branched-chain amino acid permease (azaleucine resistance). (231 aa)    
Predicted Functional Partners:
EAR10172.1
Hypothetical protein.
       0.773
EAR10173.1
Hypothetical protein.
       0.773
EAR10175.1
Hypothetical protein.
       0.773
thiP
Thiamin ABC transporter membrane component; COG1178 ABC-type Fe3+ transport system, permease component.
 
     0.742
EAR10169.1
COG4143 ABC-type thiamine transport system, periplasmic component.
 
     0.736
EAR10171.1
Thiamine transport ATP-binding protein ThiQ; COG3840 ABC-type thiamine transport system, ATPase component.
       0.697
EAR10176.1
COG0260 Leucyl aminopeptidase; Belongs to the peptidase M17 family.
       0.518
EAR10168.1
COG0510 Predicted choline kinase involved in LPS biosynthesis.
       0.467
EAR10167.1
Hypothetical protein; Belongs to the SOS response-associated peptidase family.
       0.439
EAR08357.1
Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
 
     0.422
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.