STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR10215.1COG2081 Predicted flavoproteins. (395 aa)    
Predicted Functional Partners:
EAR10213.1
Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
  
    0.821
EAR10212.1
Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
       0.794
EAR10214.1
Pseudouridine synthase (makes pseudouridine2605 in 23 S RNA); COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family.
       0.791
EAR10211.1
Hypothetical protein; COG0009 Putative translation factor (SUA5); Belongs to the SUA5 family.
     
 0.782
EAR10210.1
COG0613 Predicted metal-dependent phosphoesterases (PHP family).
       0.663
EAR10044.1
COG0415 Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
   
    0.472
EAR07640.1
COG0415 Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
   
    0.472
EAR10209.1
Protein YciI; COG2350 Uncharacterized protein conserved in bacteria.
       0.460
EAR10216.1
Hypothetical protein.
       0.455
EAR08346.1
COG0729 Outer membrane protein.
  
    0.431
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.