STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR08254.1Hypothetical protein; COG1752 Predicted esterase of the alpha-beta hydrolase superfamily. (496 aa)    
Predicted Functional Partners:
EAR07571.1
Hypothetical protein; COG1112 Superfamily I DNA and RNA helicases and helicase subunits.
    
   0.677
EAR08454.1
Hypothetical protein.
    
   0.677
EAR09335.1
Hypothetical protein.
    
   0.677
EAR08255.1
Autotransporter adhesin.
       0.467
EAR07628.1
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
  
  0.466
EAR10718.1
Carboxylic ester hydrolase; COG4188 Predicted dienelactone hydrolase.
    
 0.447
EAR07955.1
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
  
  0.440
EAR07983.1
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
  
  0.440
EAR08563.1
Putative lipase transmembrane protein; COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold.
    
 0.435
EAR08253.1
Probable two component sensor histidine kinase transcription regulator protein; COG4585 Signal transduction histidine kinase.
       0.431
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.