STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR08668.1Putative glyoxalase; COG3324 Predicted enzyme related to lactoylglutathione lyase. (121 aa)    
Predicted Functional Partners:
EAR07753.1
COG1605 Chorismate mutase.
    
  0.809
EAR11389.1
Beta-lactamase-like protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
    
  0.765
EAR08667.1
Hypothetical protein.
       0.727
EAR07470.1
COG2378 Predicted transcriptional regulator.
 
    0.554
EAR08669.1
Hypothetical protein.
       0.539
EAR08337.1
COG2378 Predicted transcriptional regulator.
 
    0.486
EAR08346.1
COG0729 Outer membrane protein.
   
    0.449
EAR10215.1
COG2081 Predicted flavoproteins.
  
    0.415
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.