STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR08689.1COG1555 DNA uptake protein and related DNA-binding proteins. (104 aa)    
Predicted Functional Partners:
EAR07404.1
Prepilin cysteine protease (C20), type IV; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
   
  
 0.722
EAR09769.1
DNA uptake protein; COG0658 Predicted membrane metal-binding protein.
  
  
 0.711
EAR10473.1
Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
    
  0.674
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
    
  0.633
EAR07403.1
COG1459 Type II secretory pathway, component PulF.
  
  
 0.623
EAR08893.1
COG1459 Type II secretory pathway, component PulF.
  
  
 0.623
EAR09733.1
General secretion pathway protein F; COG1459 Type II secretory pathway, component PulF.
  
  
 0.623
EAR09622.1
Single-strand DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
  
  
 0.611
EAR07965.1
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
  
    0.604
EAR07402.1
Type 4 fimbrial biogenesis protein PilB; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
  
  
 0.589
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.