STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR07898.1Glycosyl transferase, group 2 family protein; COG0463 Glycosyltransferases involved in cell wall biogenesis. (244 aa)    
Predicted Functional Partners:
EAR07896.1
Glycosyl transferase, group 1 family protein; COG0438 Glycosyltransferase.
 
 
 0.768
EAR07916.1
COG1216 Predicted glycosyltransferases.
  
 0.707
EAR07894.1
COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
  
  
 0.656
EAR07895.1
Hypothetical protein; COG2117 Predicted subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain.
  
    0.624
EAR07897.1
Hypothetical protein.
       0.617
EAR07899.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
     0.592
EAR07921.1
COG1216 Predicted glycosyltransferases.
  
 
 0.572
EAR09458.1
Nucleoside-diphosphate-sugar pyrophosphorylase; COG0517 FOG: CBS domain.
  
 0.501
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
 0.467
EAR11347.1
Thioesterase (4HBT) superfamily enzyme.
  
 
  0.463
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.