STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR09669.1Hypothetical protein; COG0547 Anthranilate phosphoribosyltransferase. (323 aa)    
Predicted Functional Partners:
EAR09307.1
COG0147 Anthranilate/para-aminobenzoate synthases component I.
 
 0.988
EAR08400.1
COG0147 Anthranilate/para-aminobenzoate synthases component I.
 
 0.985
trpF
COG0135 Phosphoribosylanthranilate isomerase; Belongs to the TrpF family.
 
 
 0.958
trpC
COG0134 Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
 
 
 0.939
trpB
Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
 
 
 0.928
EAR07753.1
COG1605 Chorismate mutase.
  
 
 0.923
EAR09670.1
Hypothetical desulfoviridin gamma subunit; Part of a sulfur-relay system.
 
    0.919
EAR09673.1
Hypothetical protein; COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction.
 
    0.910
EAR09308.1
COG0512 Anthranilate/para-aminobenzoate synthases component II.
 
 
 0.904
EAR09305.1
COG0512 Anthranilate/para-aminobenzoate synthases component II.
 
 
 0.901
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.